Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCTTATAAGCGCAGCTTCAGT
(((.(((((((.(((((((((&)).))))))).))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019102
GeneSymbolHOXA5
Binding site1490,1513
Score0.923
Seed0
Au0.603
Energy-23.5
Binding len23
Me-10.316
Phylopstem5.7234679999999996
Phylopflank6.351393625
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end8
Position3UTR
2D Structure