Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACAGCCGCCTGCTGG
...((((.(((((((((....&)))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019108
GeneSymbolSMG9
Binding site1857,1873
Score0.923
Seed0
Au0.412
Energy-21.5
Binding len16
Me-8.828
Phylopstem-0.5992584555555556
Phylopflank-0.20410734
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end4
PositionCDS
2D Structure