Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCAGCCAGAGCTGCAGC
((((((((..(((((.(((((&))))))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019110
GeneSymbolZKSCAN4
Binding site1522,1543
Score1.0
Seed1
Au0.515
Energy-26.0
Binding len21
Me-6.47
Phylopstem-0.11296525000000002
Phylopflank0.08391353624999999
Longest consecutive pairings10
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure