Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTCAACTGAGGACGTTTACGACTGCAGGGTGGAGC
((.((.(((((((((((((((&.)).)))))))))))))..)).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019111
GeneSymbolHLA-DRA
Binding site600,638
Score0.923
Seed0
Au0.426
Energy-19.5
Binding len25
Me-7.396
Phylopstem0.9342599875000002
Phylopflank1.648874615
Longest consecutive pairings13
Position of longest consecutive pairings8
Pairings in 3prime end8
PositionCDS
2D Structure