Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TAGATTGATCTGCCAGGC
.(((((((..((((.((.....&)).))))...))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_019116
GeneSymbolUBFD1
Binding site4449,4467
Score0.846
Seed1
Au0.529
Energy-16.4
Binding len18
Me-6.828
Phylopstem1.765601857142857
Phylopflank0.3643384537499999
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure