Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGGTAGAAGATAGTTATACAGCCATATAGCTGCAGA
(((((((((.(((((((....&.)))))))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019116
GeneSymbolUBFD1
Binding site1890,1929
Score1.0
Seed1
Au0.603
Energy-22.3
Binding len21
Me-5.18
Phylopstem-0.4062852222222222
Phylopflank-0.11218781249999998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure