Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTTGCAGCCTAGCTTGCC
..(((((((.(((((((((((&))))..)))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019117
GeneSymbolKLHL4
Binding site4000,4022
Score0.923
Seed1
Au0.529
Energy-20.6
Binding len22
Me-6.2
Phylopstem-0.6025811076923078
Phylopflank0.072553108125
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end8
Position3UTR
2D Structure