Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCATAGCTGCATTTAAAAATGGTGTTCAGGCCACTATGGCTGCT
..((((((((((((((((((.&)))).)))))))))...........................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019117
GeneSymbolKLHL4
Binding site4184,4231
Score0.846
Seed1
Au0.603
Energy-20.5
Binding len47
Me-4.957
Phylopstem0.0015395919999999748
Phylopflank0.04734015457499999
Longest consecutive pairings9
Position of longest consecutive pairings33
Pairings in 3prime end7
Position3UTR
2D Structure