Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAAACTGTGGTTGCAC
.(((((((((((((...((((&))))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019120
GeneSymbolPCDHB8
Binding site1327,1347
Score1.0
Seed1
Au0.529
Energy-23.3
Binding len20
Me-4.762
Phylopstem0.6963738461538462
Phylopflank0.12635168999999988
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure