Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTAAAAGGGCCAGGACAGAAGCGGCTGCC
..((((((((..((((..(((&.)))...))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019555
GeneSymbolARHGEF3
Binding site2381,2413
Score0.846
Seed1
Au0.5
Energy-21.5
Binding len22
Me-11.129
Phylopstem3.423375
Phylopflank4.1940044825000005
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure