Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCCCAGCTTGCAGA
(((((((((.((((((.....&))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019592
GeneSymbolRNF20
Binding site2605,2622
Score1.0
Seed1
Au0.471
Energy-21.0
Binding len17
Me-5.18
Phylopstem3.9346573
Phylopflank4.3811236575
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end3
PositionCDS
2D Structure