Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAACTGCCCAGCTGG
...(((((((((((((.....&))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019593
GeneSymbolGPCPD1
Binding site1183,1199
Score0.923
Seed0
Au0.574
Energy-18.2
Binding len16
Me-6.515
Phylopstem-0.038209613333333295
Phylopflank-0.21979618750000005
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end3
PositionCDS
2D Structure