Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCTTCTACTGCCGCAAGCTGCGC
.((((((((((((.(((....&.))).)))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019594
GeneSymbolLRRC8A
Binding site2272,2297
Score0.846
Seed1
Au0.412
Energy-23.4
Binding len19
Me-4.65
Phylopstem5.965068576923078
Phylopflank5.4326371899999994
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end3
PositionCDS
2D Structure