Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTCCAAGTAGTGAAAGAGCCACACCTGCCTTTCATCCTGTATGTCAGGTG
((((((((((((..........&.)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_019595
GeneSymbolITSN2
Binding site3529,3581
Score1.0
Seed1
Au0.574
Energy-19.1
Binding len14
Me-7.052
Phylopstem3.2906291666666667
Phylopflank2.83254688875
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure