Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCGCCGACTGCTGCTGCAT
.((((((.(((((((...(((&)))...))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019595
GeneSymbolITSN2
Binding site5189,5210
Score0.923
Seed1
Au0.338
Energy-23.7
Binding len21
Me-6.34
Phylopstem2.3884722571428574
Phylopflank3.0526932774999995
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end5
PositionCDS
2D Structure