Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTCTACACCTATATTTGCAACTCCACTCTTGTTGGCCTGGG
.((.(((..(((((((((((((&))))))))).....................))))..))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_019598
GeneSymbolKLK12
Binding site912,955
Score0.885
Seed0
Au0.529
Energy-18.3
Binding len43
Me-10.195
Phylopstem-0.025496555882352986
Phylopflank-0.27479861625
Longest consecutive pairings9
Position of longest consecutive pairings34
Pairings in 3prime end8
PositionCDS
2D Structure