Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACACTTATGGCAAAAATTCAACGGTGGACTGCAT
.(((((((((.((((......&.)))).)))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019604
GeneSymbolCRTAM
Binding site603,637
Score0.846
Seed1
Au0.529
Energy-17.1
Binding len17
Me-6.851
Phylopstem-0.36609420000000004
Phylopflank1.361580585
Longest consecutive pairings5
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure