Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACTCCACGGGGAGGGCGCCTCACAGCAGCCGCGGCA
.....(((((((((((.((((&.))))....))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019606
GeneSymbolMEPCE
Binding site1062,1102
Score0.846
Seed0
Au0.279
Energy-23.6
Binding len21
Me-13.666
Phylopstem1.1860216363636364
Phylopflank0.708065685
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure