Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAATGCCACCGTGGCTCCTGAAACGCGGGCAGT
(((((((((((((.(((.(((&)))...))).)))))))))............)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019609
GeneSymbolCPXM1
Binding site1464,1500
Score0.846
Seed1
Au0.412
Energy-18.8
Binding len36
Me-4.794
Phylopstem0.935345772
Phylopflank2.21907052625
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end6
PositionCDS
2D Structure