Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGACAGCCGCCACTGGTGCTGAGCTGCT
..((((((((((((((..(((&))).))))))))...........)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019610
GeneSymbolRBMXL1
Binding site181,211
Score0.846
Seed1
Au0.382
Energy-22.4
Binding len30
Me-4.957
Phylopstem-0.2456540640000001
Phylopflank-0.08814924375
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end6
Position5UTR
2D Structure