Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTACAAGCTGCATGCTGCAT
.(((((((((((((((.((((&)))))))).))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019841
GeneSymbolTRPV5
Binding site132,154
Score1.0
Seed1
Au0.544
Energy-24.8
Binding len22
Me-3.793
Phylopstem-0.2967641764705883
Phylopflank-0.19161801250000005
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end7
Position5UTR
2D Structure