Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCACCGCAGCCTGCC
..((((((((((.(((..(((&))))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019842
GeneSymbolKCNQ5
Binding site2787,2805
Score0.923
Seed1
Au0.441
Energy-22.2
Binding len18
Me-6.246
Phylopstem1.424263909090909
Phylopflank2.8791691900000007
Longest consecutive pairings13
Position of longest consecutive pairings5
Pairings in 3prime end6
PositionCDS
2D Structure