Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCAAGTGGTATTAAAAAGCATACAGTGTTTTATAACTGTAGTTGTG
..((((((((((((((((((.&.)))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019844
GeneSymbolSLCO1B3
Binding site1711,1759
Score1.0
Seed1
Au0.662
Energy-21.9
Binding len20
Me-4.957
Phylopstem0.5570263888888888
Phylopflank1.9524354725000002
Longest consecutive pairings18
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure