Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGCGGCAACCGCTCCCACGCCTGCCCACTTTGCTAGCCCGGCTGTG
..(((((((.(((((((((((&.))))))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019845
GeneSymbolRPRM
Binding site541,588
Score1.0
Seed1
Au0.353
Energy-23.1
Binding len21
Me-6.2
Phylopstem0.8080743
Phylopflank0.5274710775
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure