Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTCTTCCTCGGCTGCAAT
(((((((((.((..(.(((((&))))))..)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019845
GeneSymbolRPRM
Binding site413,434
Score0.923
Seed1
Au0.456
Energy-21.4
Binding len21
Me-7.559
Phylopstem0.5474044444444445
Phylopflank0.16176617499999998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure