Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTGTCTTCGGCCATCTACAGCCGCCTGCTCAGCAT
.((((((.(((((((((.(((&.)))...)))))))))..)))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019848
GeneSymbolSLC10A3
Binding site1361,1400
Score0.846
Seed1
Au0.382
Energy-22.9
Binding len27
Me-6.107
Phylopstem3.459489377777778
Phylopflank1.713351545
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure