Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGGCCATGCTGCAGCTA
....(((((((((..((((((&)))))).....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019848
GeneSymbolSLC10A3
Binding site1749,1770
Score0.978
Seed0
Au0.382
Energy-20.9
Binding len21
Me-11.139
Phylopstem0.19718893333333332
Phylopflank0.2292510615
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure