Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTACCAGGAGCGGACCTATAAGCAGCTGCT
..((((((((..((((.((((&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019850
GeneSymbolNGEF
Binding site1373,1405
Score0.808
Seed1
Au0.426
Energy-20.7
Binding len18
Me-11.129
Phylopstem4.8052572499999995
Phylopflank4.12960726875
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure