Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGCACAACAACGGCGAGCGCTACTATGCCCGCGGCTGCC
..((((((((((..(((.(((&.))).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019858
GeneSymbolGPR162
Binding site974,1016
Score0.923
Seed1
Au0.368
Energy-23.1
Binding len19
Me-7.103
Phylopstem4.2350012
Phylopflank5.439454190000001
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure