Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGCTGCATTGTGTTAAACCAAATTGTGTGAAGCGAGGTC
((((.(((((((((((((.(((&))))))))))))))..................)).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_019860
GeneSymbolHTR7
Binding site2662,2702
Score0.846
Seed0
Au0.529
Energy-18.4
Binding len40
Me-8.057
Phylopstem4.445906329032258
Phylopflank4.456257284999999
Longest consecutive pairings14
Position of longest consecutive pairings26
Pairings in 3prime end7
Position3UTR
2D Structure