Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTCGACAGCCAGACCCTTCATCTGTGGCACTTCCTGCAGCTGCAT
.(((((((((((..((((((.&.))))..........))..)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019860
GeneSymbolHTR7
Binding site1404,1450
Score0.846
Seed1
Au0.441
Energy-23.0
Binding len32
Me-5.939
Phylopstem1.7866988333333331
Phylopflank1.0231786937499998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure