Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CATTGTGTGCCT
....(((((((((((.......&))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_019888
GeneSymbolMC3R
Binding site675,687
Score0.846
Seed0
Au0.5
Energy-17.3
Binding len12
Me-9.78
Phylopstem4.689093909090909
Phylopflank4.612556717500001
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure