Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTAGGGAGATTCTCTGTGGCTGCAAC
((((((((((((((..(((((&)))))..))........)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019888
GeneSymbolMC3R
Binding site1036,1066
Score0.846
Seed1
Au0.491
Energy-20.4
Binding len30
Me-4.906
Phylopstem3.7490318390909083
Phylopflank2.96906155
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure