Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACAACCTCCCAGACTGCAAA
(((((((((.(((((((....&)))))))...))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019893
GeneSymbolASAH2
Binding site3850,3871
Score0.923
Seed1
Au0.632
Energy-20.6
Binding len21
Me-5.18
Phylopstem3.9696070000000008
Phylopflank4.9621251075
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end4
Position3UTR
2D Structure