Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCACAGCATGCAGCATGTAAA
((((((((((((((((..(((&)))))))).)))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019894
GeneSymbolTMPRSS4
Binding site5477,5499
Score0.846
Seed1
Au0.589
Energy-20.8
Binding len22
Me-3.938
Phylopstem0.08135522222222222
Phylopflank0.04427232499999999
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end6
Position3UTR
2D Structure