Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGAGATGGGCGGCCGCGGCTGA
...(((((((((((((..(((&))).......))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020039
GeneSymbolASIC1
Binding site935,959
Score0.846
Seed0
Au0.338
Energy-25.3
Binding len24
Me-6.515
Phylopstem2.435682461538462
Phylopflank5.46609364375
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure