Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCAGAGCAGCAACTGCTGAGGCTGCC
..((((((((((((((.....&.))))))))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020056
GeneSymbolHLA-DQA2
Binding site14,42
Score1.0
Seed1
Au0.515
Energy-21.2
Binding len19
Me-4.957
Phylopstem0.06468955882352938
Phylopflank0.10279166750000002
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end3
Position5UTR
2D Structure