Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCTGGGCAGCATGGACAGCACTACGGCGGCGGCGGCTGCC
..((((((((.(((((.....&.))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020063
GeneSymbolBARHL2
Binding site1065,1109
Score0.846
Seed1
Au0.324
Energy-23.5
Binding len16
Me-7.782
Phylopstem6.21371775
Phylopflank5.401187513750001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure