Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCCATTAATCTAGTTGCAGG
(((((((((.(((((...((.&))...)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020107
GeneSymbolACRV1
Binding site987,1007
Score0.846
Seed1
Au0.544
Energy-15.5
Binding len20
Me-5.413
Phylopstem0.5538031444444445
Phylopflank0.5295715875
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure