Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTAATCCCAGCTGCT
..(((((((.(((((..((((&)))).))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020117
GeneSymbolLARS1
Binding site4584,4603
Score0.846
Seed1
Au0.426
Energy-21.1
Binding len19
Me-6.433
Phylopstem2.2918507142857143
Phylopflank2.3211360425
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure