Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTACAGCTGTGAGAGCAAA
((((..((((((((((.((((&)))))))))))).)).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020117
GeneSymbolLARS1
Binding site2256,2277
Score0.923
Seed0
Au0.529
Energy-18.1
Binding len21
Me-9.958
Phylopstem3.5044414545454554
Phylopflank4.92542487125
Longest consecutive pairings12
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure