Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCGGCCTGCGCTGCAC
.((((((.((((((((.((((&)))))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020120
GeneSymbolUGGT1
Binding site5217,5237
Score0.923
Seed1
Au0.382
Energy-24.3
Binding len20
Me-6.107
Phylopstem-0.2841531111111111
Phylopflank0.23986969874999992
Longest consecutive pairings10
Position of longest consecutive pairings10
Pairings in 3prime end7
Position3UTR
2D Structure