Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCTACATGCGCAGCATGATGCAGA
(((((((((((..((((.(((&))).))))..))))))....))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020131
GeneSymbolUBQLN4
Binding site1305,1331
Score0.846
Seed1
Au0.441
Energy-22.4
Binding len26
Me-8.574
Phylopstem-0.00770673333333326
Phylopflank-0.0847956775
Longest consecutive pairings6
Position of longest consecutive pairings10
Pairings in 3prime end7
PositionCDS
2D Structure