Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCCTCATGCCGCACGCTGCT
..(((((((((((((.(((((&)))))...)).)))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020132
GeneSymbolAGPAT3
Binding site3262,3286
Score0.923
Seed1
Au0.471
Energy-24.0
Binding len24
Me-5.19
Phylopstem-1.270326026666667
Phylopflank-0.6939322997499999
Longest consecutive pairings6
Position of longest consecutive pairings7
Pairings in 3prime end7
Position3UTR
2D Structure