Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAAGGCAGCCGTGATTGGCCTCACAAAATCTGTGGCTGCAGA
((((((((((((((((.((((&.)))).))))...)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020139
GeneSymbolBDH2
Binding site519,563
Score0.846
Seed1
Au0.456
Energy-25.1
Binding len26
Me-3.938
Phylopstem-0.10181120157894737
Phylopflank0.140038888
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure