Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAAGCAGCTGCCTTAGCTTTTGCAAG
((((((((((((((((..(((&)))..))))))))...))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020139
GeneSymbolBDH2
Binding site127,155
Score0.923
Seed1
Au0.485
Energy-21.1
Binding len28
Me-3.938
Phylopstem-0.0038729681818181886
Phylopflank0.21560505125
Longest consecutive pairings8
Position of longest consecutive pairings15
Pairings in 3prime end6
PositionCDS
2D Structure