Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCGGGGTCTTCGAAGAGGAAGAGGAACTGCAGCGCAGG
((((.(((((((((.(.....&.).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020144
GeneSymbolPAPOLB
Binding site365,406
Score0.923
Seed0
Au0.603
Energy-19.7
Binding len17
Me-8.792
Phylopstem0.6507936111111111
Phylopflank0.5702096225000002
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure