Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACATGTCCTCGCCAGGC
.((((((.....(((((((...&)))))))......)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020148
GeneSymbolSPIRE1
Binding site2405,2425
Score0.846
Seed1
Au0.456
Energy-19.6
Binding len20
Me-14.577
Phylopstem0.3825845714285715
Phylopflank0.4633610075
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end5
PositionCDS
2D Structure