Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGACGAAAGTAGACTGGAGGGTAGCATTGTATGCCT
....((((((((((((......&.)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020148
GeneSymbolSPIRE1
Binding site3598,3636
Score1.0
Seed0
Au0.544
Energy-19.7
Binding len14
Me-9.547
Phylopstem4.1909350000000005
Phylopflank5.5364520724999995
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure