Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGAAGCTGACGGTAGCAATGATGAGGGCTATGAGGCTGCAGA
.....(((((((((((((...&.)))....)))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_020148
GeneSymbolSPIRE1
Binding site729,774
Score0.923
Seed0
Au0.5
Energy-23.3
Binding len19
Me-13.666
Phylopstem-0.2064549176470588
Phylopflank-0.28452591875
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure